Citations

How to Cite SnapGene

To cite SnapGene or SnapGene Viewer in a publication, please use: “SnapGene software (www.snapgene.com)”

Cloning and Sequence Verification

Drummond, E., Kavanagh, T., Pires, G., Marta-Ariza, M., Kanshin, E., Nayak, S., … Wisniewski, T. (2022). The amyloid plaque proteome in early onset Alzheimer’s disease and Down syndrome. Acta Neuropathologica Communications, 10(1), 1–24. https://dx.doi.org/10.1186/s40478-022-01356-1

Gallo, C. M., Labadorf, A. T., Ho, A., & Beffert, U. (2022). Single molecule, long-read Apoer2 sequencing identifies conserved and species-specific splicing patterns. Genomics, 114(2), 110318. https://doi.org/10.1016/j.ygeno.2022.110318

Umar, M. I., Chan, C.-Y., & Kwok, C. K. (2022). Development of RNA G-quadruplex (rG4)-targeting l-RNA aptamers by rG4-SELEX. Nature Protocols, 1–30. Umar, M. I., Chan, C.-Y., & Kwok, C. K. (2022). Development of RNA G-quadruplex (rG4)-targeting l-RNA aptamers by rG4-SELEX. Nature Protocols, 1–30. https://doi.org/10.1038/s41596-022-00679-6

Pitman, T. L., Philbrook, R. N., Vetterli, M. R., & Warren, J. G. (2021). First report of Pythium ultimum causing crown rot in greenhouse-grown Cannabis sativa in California. Plant Disease, 105(4), 1230. https://doi.org/10.1094/pdis-10-20-2228-pdn

Wang, C., Cheng, J. K. W., Zhang, Q., Hughes, N. W., Xia, Q., Winslow, M. M., & Cong, L. (2021). Microbial single-strand annealing proteins enable CRISPR gene-editing tools with improved knock-in efficiencies and reduced off-target effects. Nucleic Acids Research, 49(6), e36–e36. https://doi.org/10.1093/nar/gkaa1264

MacDonald, M. A., Barry, C., Groves, T., Martínez, V. S., Gray, P. P., Baker, K., … Marcellin, E. (2022). Modeling apoptosis resistance in CHO cells with CRISPR‐mediated knockouts of Bak1, Bax, and Bok. Biotechnology and Bioengineering.https://doi.org/10.1002/bit.28062

Escalera, A., Gonzalez-Reiche, A. S., Aslam, S., Mena, I., Laporte, M., Pearl, R. L., … van de Guchte, A. (2022). Mutations in SARS-CoV-2 variants of concern link to increased spike cleavage and virus transmission. Cell Host & Microbe, 30(3), 373–387. https://doi.org/10.1016%2Fj.chom.2022.01.006

Doerner, J., Sallard, E., Zhang, W., Solanki, M., Liu, J., Ehrke-Schulz, E., … Ehrhardt, A. (2022). Novel group C oncolytic adenoviruses carrying a microRNA inhibitor demonstrate enhanced oncolytic activity in vitro and in vivo. Molecular Cancer Therapeutics. https://doi.org/10.1158/1535-7163.MCT-21-0240

Cloning and Primer Design

Dao, V. L., Chan, S., Zhang, J., Ngo, R. K. J., & Poh, C. L. (2022). Single 3′-exonuclease-based multifragment DNA assembly method (SENAX). Scientific Reports, 12(1), 4004. https://doi.org/10.1038/s41598-022-07878-x

Gauttam, R., Mukhopadhyay, A., & Singer, S. W. (2020). Construction of a novel dual-inducible duet-expression system for gene (over) expression in Pseudomonas putida. Plasmid, 110, 102514. https://doi.org/10.1016/j.plasmid.2020.102514

Restriction Cloning

Dey, J., Mahapatra, S. R., Patnaik, S., Lata, S., Kushwaha, G. S., Panda, R. K., … Suar, M. (2022). Molecular Characterization and Designing of a Novel Multiepitope Vaccine Construct Against Pseudomonas aeruginosa. International Journal of Peptide Research and Therapeutics, 28(2), 1–19. https://doi.org/10.1007/s10989-021-10356-z

Dogan, M., Kozhaya, L., Placek, L., Karabacak, F., Yigit, M., & Unutmaz, D. (n.d.). Targeting SARS-CoV-2 Infection Through CAR-T Like Bispecific T Cell Engagers Incorporating ACE2. Available at SSRN 4087366. https://doi.org/10.1101/2022.01.19.476940

Sarker, A., Rathore, A. S., & Gupta, R. D. (2019). Evaluation of scFv protein recovery from E. coli by in vitro refolding and mild solubilization process. Microbial Cell Factories, 18(1), 5. https://doi.org/10.1186/s12934-019-1053-9

Golden Gate Assembly

Sarrion-Perdigones, A., Chang, L., Gonzalez, Y., Gallego-Flores, T., Young, D. W., & Venken, K. J. T. (2019). Examining multiple cellular pathways at once using multiplex hextuple luciferase assaying. Nature Communications, 10(1), 5710. https://doi.org/10.1038/s41467-019-13651-y

In-Fusion Cloning

Peng, H., Dong, X., Lu, H., Kong, X., Zha, X., & Wang, Y. (2022). A putative F‐box‐domain‐encoding gene AOL_s00076g207 regulates the development and pathogenicity of Arthrobotrys oligospora. Journal of Basic Microbiology, 62(1), 74–81.

CRISPR

Tripathi, J. N., Ntui, V. O., Ron, M., Muiruri, S. K., Britt, A., & Tripathi, L. (2019). CRISPR/Cas9 editing of endogenous banana streak virus in the B genome of Musa spp. overcomes a major challenge in banana breeding. Communications Biology, 2(1), 46. https://doi.org/10.1038/s42003-019-0288-7

Srivastava, A., Gupta, T., Srivastava, S., Dhir, S., Kumar, P., Singhal, T., … Rishi, N. (2022). Development of a new Collateral Cleavage-independent CRISPR/Cas12a based easy detection system for plant viruses. Journal of Virological Methods, 300, 114432. https://doi.org/10.1016/j.jviromet.2021.114432

Feature Annotation

Tello, M., Oporto, B., Lavín, J. L., Ocejo, M., & Hurtado, A. (2022). Characterization of a carbapenem-resistant Escherichia coli from dairy cattle harbouring blaNDM-1 in an IncC plasmid. Journal of Antimicrobial Chemotherapy, 77(3), 843–845. https://doi.org/10.1093/jac/dkab455

Synthetic Biology

Mante, J., Roehner, N., Keating, K., McLaughlin, J. A., Young, E., Beal, J., & Myers, C. J. (2021). Curation Principles Derived from the Analysis of the SBOL iGEM Data Set. ACS Synthetic Biology, 10(10), 2592–2606. https://dx.doi.org/10.1021/acssynbio.1c00225

Sequence Alignment

Weber, S., Ramirez, C., & Doerfler, W. (2020). Signal hotspot mutations in SARS-CoV-2 genomes evolve as the virus spreads and actively replicates in different parts of the world. Virus Research, 289, 198170. https://doi.org/10.1016/j.virusres.2020.198170

Vaccine Development

Samad, A., Ahammad, F., Nain, Z., Alam, R., Imon, R. R., Hasan, M., & Rahman, M. S. (2022). Designing a multi-epitope vaccine against SARS-CoV-2: an immunoinformatics approach. Journal of Biomolecular Structure and Dynamics, 40(1), 14–30. https://doi.org/10.1080/07391102.2020.1792347

Fadaka, A. O., Sibuyi, N. R. S., Martin, D. R., Goboza, M., Klein, A., Madiehe, A. M., & Meyer, M. (2021). Immunoinformatics design of a novel epitope-based vaccine candidate against dengue virus. Scientific Reports, 11(1), 19707. https://doi.org/10.1038/s41598-021-99227-7

Francis, J. E., Skakic, I., & Smooker, P. M. (2022). Design and Preparation of Solid Lipid Nanoparticle (SLN)-Mediated DNA Vaccines. In Vaccine Design (pp. 355–366). Springer. https://dx.doi.org/10.1007/978-1-0716-1892-9_18