pAUR123

Yeast centromeric vector with an aureobasidin A resistance marker, for expressing a gene under control of the ADH1 promoter and terminator.

Sequence Author: TaKaRa

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HomePlasmidsYeast PlasmidspAUR123
pAUR123 R Primer (6701 .. 6724) HpaI (6621) SacI - XbaI (6612) Eco53kI (6610) MCS PaeR7I - PspXI - XhoI (6605) SalI (6600) SmaI (6597) KpnI - TspMI - XmaI (6595) Acc65I (6591) pAUR123 F Primer (6550 .. 6568) BsgI (6536) DraIII (5205) BmgBI (5188) EcoRV (5069) NsiI (4672) ApaI (4496) PspOMI (4492) BsiWI (4471) BstEII (4465) EcoRI (4439) HindIII (3993) SbfI (3441) XmnI (444) FspI (821) BglI (926) AhdI (1044) NdeI (2111) BstAPI (2115) BsaAI (2182) PfoI (2287) BsmBI - Esp3I (2289) SpeI (2388) NheI (3223) BmtI (3227) BtgZI (3335) BsrGI (3336) BglII (3408) pAUR123 6982 bp
HpaI  (6621)
1 site		 G T T A A C C A A T T G
SacI  (6612)
1 site		 G A G C T C C T C G A G
XbaI  (6612)
1 site		 T C T A G A A G A T C T
Eco53kI  (6610)
1 site		 G A G C T C C T C G A G
PaeR7I  (6605)
1 site		 C T C G A G G A G C T C
PaeR7I does not recognize the sequence CTCTCGAG.
PspXI  (6605)
1 site		 V C T C G A G B B G A G C T C V
XhoI  (6605)
1 site		 C T C G A G G A G C T C
SalI  (6600)
1 site		 G T C G A C C A G C T G
SmaI  (6597)
1 site		 C C C G G G G G G C C C
SmaI can be used at 37°C for brief incubations.
KpnI  (6595)
1 site		 G G T A C C C C A T G G
TspMI  (6595)
1 site		 C C C G G G G G G C C C
XmaI  (6595)
1 site		 C C C G G G G G G C C C
Cleavage may be enhanced when more than one copy of the XmaI recognition sequence is present.
Acc65I  (6591)
1 site		 G G T A C C C C A T G G
BsgI  (6536)
1 site		 G T G C A G ( N ) 14 N N C A C G T C ( N ) 14
Efficient cleavage requires at least two copies of the BsgI recognition sequence.
Sticky ends from different BsgI sites may not be compatible.
For full activity, add fresh S-adenosylmethionine (SAM).
DraIII  (5205)
1 site		 C A C N N N G T G G T G N N N C A C
Sticky ends from different DraIII sites may not be compatible.
BmgBI  (5188)
1 site		 C A C G T C G T G C A G
This recognition sequence is asymmetric, so ligating blunt ends generated by BmgBI will not always regenerate a BmgBI site.
EcoRV  (5069)
1 site		 G A T A T C C T A T A G
EcoRV is reportedly more prone than its isoschizomer Eco32I to delete a base after cleavage.
NsiI  (4672)
1 site		 A T G C A T T A C G T A
ApaI  (4496)
1 site		 G G G C C C C C C G G G
ApaI can be used between 25°C and 37°C.
PspOMI  (4492)
1 site		 G G G C C C C C C G G G
BsiWI  (4471)
1 site		 C G T A C G G C A T G C
BsiWI is typically used at 55°C, but is 50% active at 37°C.
BstEII  (4465)
1 site		 G G T N A C C C C A N T G G
Sticky ends from different BstEII sites may not be compatible.
BstEII is typically used at 60°C, but is 50% active at 37°C.
EcoRI  (4439)
1 site		 G A A T T C C T T A A G
HindIII  (3993)
1 site		 A A G C T T T T C G A A
SbfI  (3441)
1 site		 C C T G C A G G G G A C G T C C
XmnI  (444)
1 site		 G A A N N N N T T C C T T N N N N A A G
FspI  (821)
1 site		 T G C G C A A C G C G T
BglI  (926)
1 site		 G C C N N N N N G G C C G G N N N N N C C G
Sticky ends from different BglI sites may not be compatible.
AhdI  (1044)
1 site		 G A C N N N N N G T C C T G N N N N N C A G
The 1-base overhangs produced by AhdI may be hard to ligate.
Sticky ends from different AhdI sites may not be compatible.
NdeI  (2111)
1 site		 C A T A T G G T A T A C
Prolonged incubation with NdeI may lead to removal of additional nucleotides.
BstAPI  (2115)
1 site		 G C A N N N N N T G C C G T N N N N N A C G
Sticky ends from different BstAPI sites may not be compatible.
BsaAI  (2182)
1 site		 Y A C G T R R T G C A Y
PfoI  (2287)
1 site		 T C C N G G A A G G N C C T
Sticky ends from different PfoI sites may not be compatible.
BsmBI  (2289)
1 site		 C G T C T C N G C A G A G N ( N ) 4
Sticky ends from different BsmBI sites may not be compatible.
BsmBI-v2 is an improved version of BsmBI.
Esp3I  (2289)
1 site		 C G T C T C N G C A G A G N ( N ) 4
Sticky ends from different Esp3I sites may not be compatible.
SpeI  (2388)
1 site		 A C T A G T T G A T C A
NheI  (3223)
1 site		 G C T A G C C G A T C G
BmtI  (3227)
1 site		 G C T A G C C G A T C G
BtgZI  (3335)
1 site		 G C G A T G ( N ) 10 C G C T A C ( N ) 10 ( N ) 4
Sticky ends from different BtgZI sites may not be compatible.
After cleavage, BtgZI can remain bound to DNA and alter its electrophoretic mobility.
BtgZI is typically used at 60°C, but is 75% active at 37°C.
BsrGI  (3336)
1 site		 T G T A C A A C A T G T
BsrGI is typically used at 37°C, but is even more active at 60°C.
BglII  (3408)
1 site		 A G A T C T T C T A G A
pAUR123 R Primer
24-mer  /  33% GC
1 binding site
6701 .. 6724  =  24 annealed bases
Tm  =  54°C
pAUR123 F Primer
19-mer  /  37% GC
1 binding site
6550 .. 6568  =  19 annealed bases
Tm  =  51°C
AurR
4017 .. 5222  =  1206 bp
401 amino acids  =  45.2 kDa
Product: aureobasidin A-resistant mutant of S. cerevisiae inositol phosphorylceramide synthase (Aeed et al., 2009)
confers fungal resistance to aureobasidin A
AurR
4017 .. 5222  =  1206 bp
401 amino acids  =  45.2 kDa
Product: aureobasidin A-resistant mutant of S. cerevisiae inositol phosphorylceramide synthase (Aeed et al., 2009)
confers fungal resistance to aureobasidin A
AmpR
257 .. 1117  =  861 bp
286 amino acids  =  31.5 kDa
2 segments
   Segment 1:  signal sequence  
   257 .. 325  =  69 bp
   23 amino acids  =  2.6 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
257 .. 1117  =  861 bp
286 amino acids  =  31.5 kDa
2 segments
   Segment 2:  
   326 .. 1117  =  792 bp
   263 amino acids  =  28.9 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
257 .. 1117  =  861 bp
286 amino acids  =  31.5 kDa
2 segments
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
ori
1288 .. 1876  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
1288 .. 1876  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ARS1
3196 .. 3649  =  454 bp
S. cerevisiae autonomously replicating sequence ARS1
ARS1
3196 .. 3649  =  454 bp
S. cerevisiae autonomously replicating sequence ARS1
ADH1 promoter
6195 .. 6590  =  396 bp
promoter for alcohol dehydrogenase 1
ADH1 promoter
6195 .. 6590  =  396 bp
promoter for alcohol dehydrogenase 1
CEN4
2903 .. 3195  =  293 bp
S. cerevisiae CEN4 centromere
CEN4
2903 .. 3195  =  293 bp
S. cerevisiae CEN4 centromere
ADH1 terminator
6628 .. 6815  =  188 bp
transcription terminator for the S. cerevisiae alcohol dehydrogenase 1 (ADH1) gene
ADH1 terminator
6628 .. 6815  =  188 bp
transcription terminator for the S. cerevisiae alcohol dehydrogenase 1 (ADH1) gene
AmpR promoter
152 .. 256  =  105 bp
AmpR promoter
152 .. 256  =  105 bp
MCS
6591 .. 6624  =  34 bp
multiple cloning site
MCS
6591 .. 6624  =  34 bp
multiple cloning site
ORF:  257 .. 1117  =  861 bp
ORF:  286 amino acids  =  31.5 kDa
ORF:  4733 .. 5020  =  288 bp
ORF:  95 amino acids  =  11.5 kDa
ORF:  5747 .. 5986  =  240 bp
ORF:  79 amino acids  =  9.2 kDa
ORF:  6782 .. 48  =  249 bp
ORF:  82 amino acids  =  9.1 kDa
ORF:  3402 .. 3755  =  354 bp
ORF:  117 amino acids  =  13.4 kDa
ORF:  4017 .. 5222  =  1206 bp
ORF:  401 amino acids  =  45.2 kDa
ORF:  4232 .. 4456  =  225 bp
ORF:  74 amino acids  =  8.1 kDa
ORF:  5534 .. 5929  =  396 bp
ORF:  131 amino acids  =  15.0 kDa
ORF:  721 .. 987  =  267 bp
ORF:  88 amino acids  =  9.2 kDa
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Individual Sequences & Maps

bleMX6
pFA6a-kanMX6
pPIC6(alpha) B
pYES2.1-E
hphMX6
pFA6a-kanMX6-PGAL1
pPIC6(alpha) C
pYES2 CT
kanMX
pFA6a-kanMX6-PGAL1-3HA
pPIC9
pYES2 NT A
kanMX2
pFA6a-kanMX6-PGAL1-GFP
pPIC9K
pYES2 NT B
kanMX4
pFA6a-kanMX6-PGAL1-GST
pPICZ A
pYES2 NT C
kanMX6
pFA6a-natMX6
pPICZ B
pYES3 CT
natMX6
pFA6a-TRP1
pPICZ C
pYES6 CT
pAbAi
pFA6a-TRP1-PGAL1
pPICZ(alpha) A
pYM25
pAD-GAL4
pFA6a-TRP1-PGAL1-3HA
pPICZ(alpha) B
pYM26
pAG25
pFA6a-TRP1-PGAL1-GFP
pPICZ(alpha) C
pYM44
pAG29
pFA6a-TRP1-PGAL1-GST
pPink-HC
YCp50
pAG32
pFLD
pPink-LC
YCp50-poly
pAO815
pFLD(alpha)
pPINK(alpha)-HC
YCplac111
patMX4
pGAD-C1
pRS303
YCplac22
pAUR101
pGAD-C2
pRS304
YCplac33
pAUR112
pGAD-C3
pRS305
YEp13
pAUR123
pGADT7 AD
pRS306
YEp24
pAUR224
pGADT7-Rec
pRS313
YEp351
pBridge
pGADT7-Rec (linearized)
pRS314
YEp352
pDH25
pGAPZ A
pRS315
YEp353
pEG202
pGAPZ B
pRS316
YEp354
pESC-HIS
pGAPZ C
pRS403
YEp355
pESC-LEU
pGAPZ(alpha) A
pRS404
YEp356
pESC-TRP
pGAPZ(alpha) B
pRS405
YEp356R
pESC-URA
pGAPZ(alpha) C
pRS406
YEp357
pFA6-kanMX4
pGBD-C1
pRS413
YEp357R
pFA6a
pGBD-C2
pRS414
YEp358
pFA6a-12Pk-kanMX6
pGBD-C3
pRS415
YEp358R
pFA6a-13Myc-His3MX6
pGBDU-C1
pRS416
YEp363
pFA6a-13Myc-kanMX6
pGBDU-C2
pRS423
YEp364
pFA6a-13Myc-TRP1
pGBDU-C3
pRS424
YEp365
pFA6a-3HA-His3MX6
pGBKT7
pRS425
YEp366
pFA6a-3HA-kanMX6
pGilda
pRS426
YEp366R
pFA6a-3HA-TRP1
pHIL-D2
pSpot5
YEp367
pFA6a-5FLAG-kanMX6
pHIL-S1
pSpot6
YEp367R
pFA6a-bleMX6
pJG4-5
pSpot7
YEp368
pFA6a-GFP(S65T)-His3MX6
pKLAC1
pSpot8
YEp368R
pFA6a-GFP(S65T)-kanMX6
pKLAC2
pTEF1 Zeo
YEplac112
pFA6a-GFP(S65T)-TRP1
pOAD
pUCATPH
YEplac181
pFA6a-GST-His3MX6
pOBD2
pY-secSUMOstar
YEplac195
pFA6a-GST-kanMX6
pP-secSUMO3
pY-SUMOstar
YIp351
pFA6a-GST-TRP1
pPIC3
pYC2-E
YIp352
pFA6a-His3MX6
pPIC3.5
pYC2 CT
YIp5
pFA6a-His3MX6-PGAL1
pPIC3.5K
pYC2 NT A
YIplac128
pFA6a-His3MX6-PGAL1-3HA
pPIC6 A
pYC2 NT B
YIplac204
pFA6a-His3MX6-PGAL1-GFP
pPIC6 B
pYC2 NT C
YIplac211
pFA6a-His3MX6-PGAL1-GST
pPIC6 C
pYC6 CT
YRp7
pFA6a-hphMX6
pPIC6(alpha) A
pYES2
alpha-factor secretion signal

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