pAB-6xHis

Baculovirus transfer plasmid for high-level expression of proteins with a thrombin-cleavable N-terminal 6xHis tag.

Sequence Author: AB Vector

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HomePlasmidsInsect Cell VectorspAB-6xHis
NdeI (9484) ScaI (8793) BpmI (8383) AlwNI (7836) PspFI (7728) BseYI (7724) BspQI - SapI (7304) FspAI (6387) SgrDI (6234) SgrAI (5965) baculovirus recombination region (ORF1629) SnaBI (4877) PasI (486) PacI (583) XcmI (746) BtgI (868) SacII (871) PspOMI (1395) ApaI - BanII (1399) StyI (1501) PaeR7I - PspXI - XhoI (1901) SphI (2135) BbvCI - Bpu10I (3405) baculovirus recombination region (lef2/ORF603) NgoMIV (3770) NaeI (3772) EcoRV (4000) BamHI (4129) ATG 6xHis SpeI (4173) thrombin site TspMI - XmaI (4192) SmaI (4194) XbaI (4203) EcoRI (4207) EagI - NotI (4218) BglII - PstI (4228) KflI - PpuMI (4246) pAB-6xHis™ 9698 bp
NdeI  (9484)
1 site		 C A T A T G G T A T A C
Prolonged incubation with NdeI may lead to removal of additional nucleotides.
ScaI  (8793)
1 site		 A G T A C T T C A T G A
BpmI  (8383)
1 site		 C T G G A G ( N ) 14 N N G A C C T C ( N ) 14
Efficient cleavage requires at least two copies of the BpmI recognition sequence.
Sticky ends from different BpmI sites may not be compatible.
After cleavage, BpmI can remain bound to DNA and alter its electrophoretic mobility.
BpmI quickly loses activity at 37°C.
AlwNI  (7836)
1 site		 C A G N N N C T G G T C N N N G A C
Sticky ends from different AlwNI sites may not be compatible.
PspFI  (7728)
1 site		 C C C A G C G G G T C G
BseYI  (7724)
1 site		 C C C A G C G G G T C G
After cleavage, BseYI can remain bound to DNA and alter its electrophoretic mobility.
BspQI  (7304)
1 site		 G C T C T T C N C G A G A A G N N N N
Sticky ends from different BspQI sites may not be compatible.
SapI  (7304)
1 site		 G C T C T T C N C G A G A A G N N N N
Sticky ends from different SapI sites may not be compatible.
SapI gradually settles in solution, so a tube of SapI should be mixed before removing an aliquot.
FspAI  (6387)
1 site		 R T G C G C A Y Y A C G C G T R
SgrDI  (6234)
1 site		 C G T C G A C G G C A G C T G C
SgrAI  (5965)
1 site		 C R C C G G Y G G Y G G C C R C
Efficient cleavage requires at least two copies of the SgrAI recognition sequence.
SnaBI  (4877)
1 site		 T A C G T A A T G C A T
PasI  (486)
1 site		 C C C W G G G G G G W C C C
Sticky ends from different PasI sites may not be compatible.
PacI  (583)
1 site		 T T A A T T A A A A T T A A T T
XcmI  (746)
1 site		 C C A N N N N N N N N N T G G G G T N N N N N N N N N A C C
The 1-base overhangs produced by XcmI may be hard to ligate.
Sticky ends from different XcmI sites may not be compatible.
BtgI  (868)
1 site		 C C R Y G G G G Y R C C
Sticky ends from different BtgI sites may not be compatible.
SacII  (871)
1 site		 C C G C G G G G C G C C
Efficient cleavage requires at least two copies of the SacII recognition sequence.
PspOMI  (1395)
1 site		 G G G C C C C C C G G G
ApaI  (1399)
1 site		 G G G C C C C C C G G G
ApaI can be used between 25°C and 37°C.
BanII  (1399)
1 site		 G R G C Y C C Y C G R G
Sticky ends from different BanII sites may not be compatible.
StyI  (1501)
1 site		 C C W W G G G G W W C C
Sticky ends from different StyI sites may not be compatible.
PaeR7I  (1901)
1 site		 C T C G A G G A G C T C
PaeR7I does not recognize the sequence CTCTCGAG.
PspXI  (1901)
1 site		 V C T C G A G B B G A G C T C V
XhoI  (1901)
1 site		 C T C G A G G A G C T C
SphI  (2135)
1 site		 G C A T G C C G T A C G
BbvCI  (3405)
1 site		 C C T C A G C G G A G T C G
Bpu10I  (3405)
1 site		 C C T N A G C G G A N T C G
Cleavage may be enhanced when more than one copy of the Bpu10I recognition sequence is present.
This recognition sequence is asymmetric, so ligating sticky ends generated by Bpu10I will not always regenerate a Bpu10I site.
Sticky ends from different Bpu10I sites may not be compatible.
NgoMIV  (3770)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NgoMIV recognition sequence.
NaeI  (3772)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NaeI recognition sequence.
EcoRV  (4000)
1 site		 G A T A T C C T A T A G
EcoRV is reportedly more prone than its isoschizomer Eco32I to delete a base after cleavage.
BamHI  (4129)
1 site		 G G A T C C C C T A G G
After cleavage, BamHI-HF® (but not the original BamHI) can remain bound to DNA and alter its electrophoretic mobility.
SpeI  (4173)
1 site		 A C T A G T T G A T C A
TspMI  (4192)
1 site		 C C C G G G G G G C C C
XmaI  (4192)
1 site		 C C C G G G G G G C C C
Cleavage may be enhanced when more than one copy of the XmaI recognition sequence is present.
SmaI  (4194)
1 site		 C C C G G G G G G C C C
SmaI can be used at 37°C for brief incubations.
XbaI  (4203)
1 site		 T C T A G A A G A T C T
EcoRI  (4207)
1 site		 G A A T T C C T T A A G
EagI  (4218)
1 site		 C G G C C G G C C G G C
NotI  (4218)
1 site		 G C G G C C G C C G C C G G C G
BglII  (4228)
1 site		 A G A T C T T C T A G A
PstI  (4228)
1 site		 C T G C A G G A C G T C
KflI  (4246)
1 site		 G G G W C C C C C C W G G G
Sticky ends from different KflI sites may not be compatible.
PpuMI  (4246)
1 site		 R G G W C C Y Y C C W G G R
Sticky ends from different PpuMI sites may not be compatible.
AmpR
8240 .. 9100  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
   Segment 2:  
   8240 .. 9031  =  792 bp
   263 amino acids  =  28.9 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
8240 .. 9100  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
   Segment 1:  signal sequence  
   9032 .. 9100  =  69 bp
   23 amino acids  =  2.6 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
8240 .. 9100  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
baculovirus recombination region (lef2/ORF603)
3170 .. 3997  =  828 bp
contains ORF603 and part of lef2
baculovirus recombination region (lef2/ORF603)
3170 .. 3997  =  828 bp
contains ORF603 and part of lef2
baculovirus recombination region (ORF1629)
4713 .. 5418  =  706 bp
contains part of ORF1629
baculovirus recombination region (ORF1629)
4713 .. 5418  =  706 bp
contains part of ORF1629
ori
7481 .. 8069  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
7481 .. 8069  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
AmpR promoter
9101 .. 9205  =  105 bp
AmpR promoter
9101 .. 9205  =  105 bp
polyhedrin promoter
4001 .. 4092  =  92 bp
promoter for the baculovirus polyhedrin gene
polyhedrin promoter
4001 .. 4092  =  92 bp
promoter for the baculovirus polyhedrin gene
MCS
4192 .. 4251  =  60 bp
multiple cloning site
MCS
4192 .. 4251  =  60 bp
multiple cloning site
ATG
4138 .. 4140  =  3 bp
1 amino acid  =  149.2 Da
Product: start codon
ATG
4138 .. 4140  =  3 bp
1 amino acid  =  149.2 Da
Product: start codon
6xHis
4147 .. 4164  =  18 bp
6 amino acids  =  840.9 Da
Product: 6xHis affinity tag
6xHis
4147 .. 4164  =  18 bp
6 amino acids  =  840.9 Da
Product: 6xHis affinity tag
thrombin site
4174 .. 4191  =  18 bp
6 amino acids  =  627.7 Da
Product: thrombin recognition and cleavage site
thrombin site
4174 .. 4191  =  18 bp
6 amino acids  =  627.7 Da
Product: thrombin recognition and cleavage site
ORF:  76 .. 582  =  507 bp
ORF:  168 amino acids  =  19.3 kDa
ORF:  2662 .. 3294  =  633 bp
ORF:  210 amino acids  =  23.9 kDa
ORF:  4138 .. 4800  =  663 bp
ORF:  220 amino acids  =  25.5 kDa
ORF:  6454 .. 7044  =  591 bp
ORF:  196 amino acids  =  22.9 kDa
ORF:  6878 .. 7156  =  279 bp
ORF:  92 amino acids  =  10.5 kDa
ORF:  969 .. 1241  =  273 bp
ORF:  90 amino acids  =  9.7 kDa
ORF:  2352 .. 2681  =  330 bp
ORF:  109 amino acids  =  12.4 kDa
ORF:  8370 .. 8636  =  267 bp
ORF:  88 amino acids  =  9.2 kDa
ORF:  9486 .. 15  =  228 bp
ORF:  75 amino acids  =  8.8 kDa
ORF:  4830 .. 6455  =  1626 bp
ORF:  541 amino acids  =  60.5 kDa
ORF:  614 .. 1600  =  987 bp
ORF:  328 amino acids  =  37.8 kDa
ORF:  1868 .. 2323  =  456 bp
ORF:  151 amino acids  =  17.6 kDa
ORF:  3332 .. 3937  =  606 bp
ORF:  201 amino acids  =  23.6 kDa
ORF:  8240 .. 9100  =  861 bp
ORF:  286 amino acids  =  31.6 kDa
ORF:  3376 .. 3606  =  231 bp
ORF:  76 amino acids  =  9.3 kDa
ORF:  4204 .. 4512  =  309 bp
ORF:  102 amino acids  =  11.2 kDa
ORF:  4537 .. 4812  =  276 bp
ORF:  91 amino acids  =  10.5 kDa
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Individual Sequences & Maps

BaculoDirect C-Term Linear DNA
pBACgus-5
pIEx Bac-1
pMT BiP V5-His A
BaculoDirect N-Term Linear DNA
pBACgus-6
pIEx Bac-1 Ek_LIC (linearized)
pMT BiP V5-His B
pAB-6xHis-MBP
pBACgus4x-1
pIEx Bac-3
pMT BiP V5-His C
pAB-6xHis
pBacPAK8
pIEx Bac-3 3C_LIC (linearized)
pMT V5-His A
pAB-bee
pBacPAK9
pIEx Bac-4
pMT V5-His B
pAB-bee-8xHis
pBACsurf-1
pIEx Bac-4 Ek_LIC (linearized)
pMT V5-His C
pAB-bee-FH
pBAC-1
pIEx Bac-5
pQE-TriSystem
pAB-GST
pBAC-2cp
pIEx Bac-5 3C_LIC (linearized)
pQE-TriSystem His-Strep1
pAB-MBP
pBAC-3
pIEx-1
pQE-TriSystem His-Strep2
pAc5.1 V5-His A
pBAC-5
pIEx-10
pQE-TriSystem Strep
pAc5.1 V5-His B
pBAC-6
pIEx-10 Ek_LIC
pQE-Trisystem-5
pAc5.1 V5-His C
pBiEx-1
pIEx-10 Ek_LIC (linearized)
pQE-Trisystem-6
pAcAB3
pBiEx-2
pIEx-2
pQE-TriSystem-7
pAcAB4
pBiEx-3
pIEx-3
pTriEx-1.1
pACEBac1
pCoBlast
pIEx-4
pTriEx-1.1 Hygro
pACEBac2
pCoHygro
pIEx-5
pTriEx-1.1 Neo
pAcG2T
pDEST10
pIEx-6
pTriEx-2
pAcG3X
pDEST20
pIEx-7 Ek_LIC
pTriEx-2 Hygro
pAcGHLT A
pDEST8
pIEx-7 Ek_LIC (linearized)
pTriEx-2 Neo
pAcGHLT B
pDream2.1 MCS
pIEx-8
pTriEx-3
pAcGHLT C
pFastBac Dual
pIEx-8 Ek_LIC
pTriEx-3 Hygro
pAcGP67-A
pFastBac CT-TOPO (linearized)
pIEx-8 Ek_LIC (linearized)
pTriEx-3 Neo
pAcGP67-B
pFastBac HBM-TOPO (linearized)
pIEx-9
pTriEx-4
pAcGP67-C
pFastBac NT-TOPO (linearized)
pIEx-9 3C_LIC
pTriEx-4 Ek_LIC (linearized)
pAcHLT A
pFastBac1
pIEx-9 3C_LIC (linearized)
pTriEx-4 Hygro
pAcHLT B
pFastBacHT A
pIZ V5-His
pTriEx-4 Neo
pAcHLT C
pFastBacHT B
pIZT V5-His
pTriEx-5
pAcMP2
pFastBacHT C
pMelBac A
pTriEx-5 Ek_LIC (linearized)
pAcMP3
pI-secSUMOstar
pMelBac B
pTriEx-6
pAcSecG2T
pI-SUMOstar
pMelBac C
pTriEx-6 3C_LIC (linearized)
pAcSG2
pIB V5-His
pMIB V5-His A
pTriEx-7
pAcUW51
pIB V5-His-DEST
pMIB V5-His B
pTriEx-7 Ek_LIC (linearized)
pBAC4x-1
pIDC
pMIB V5-His C
pVL-FH
pBACgus-1
pIDK
pMT-DEST48
pVL1392
pBACgus-2cp
pIDS
pMT BioEase-DEST
pVL1393
pBACgus-3

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