pLVX-TetOne

All-in-one lentiviral vector for strong inducible expression of genes using the Tet-On® system.

Sequence Author: Clontech (TaKaRa)

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SgrDI (7911) SspI (7794) PvuI (7360) BglI (7110) DrdI (6208) PciI (6100) BmtI (5716) NheI (5712) KpnI (4930) Acc65I (4926) Bsu36I (4922) PstI (4806) SacII (4704) NcoI (4609) PflMI (4442) MluI (4188) SmaI (4181) TspMI - XmaI (4179) FseI (1150) BbvCI - Bpu10I (1424) BstAPI (1453) AleI (1577) KflI - PpuMI (1934) cPPT/CTS BamHI (2496) AgeI - SgrAI (2508) BstZ17I (2516) EcoRI (2522) PaeR7I - PspXI - XhoI (2893) BstXI (2915) BsmBI - Esp3I - SpeI (3168) MscI (3234) AscI (3257) XbaI (3444) BfuAI - BspMI (3998) NdeI (4020) pLVX-TetOne™ 8279 bp
SgrDI  (7911)
1 site
C G T C G A C G G C A G C T G C
SspI  (7794)
1 site
A A T A T T T T A T A A
PvuI  (7360)
1 site
C G A T C G G C T A G C
BglI  (7110)
1 site
G C C N N N N N G G C C G G N N N N N C C G

Sticky ends from different BglI sites may not be compatible.
DrdI  (6208)
1 site
G A C N N N N N N G T C C T G N N N N N N C A G

Sticky ends from different DrdI sites may not be compatible.
PciI  (6100)
1 site
A C A T G T T G T A C A

PciI is inhibited by nonionic detergents.
BmtI  (5716)
1 site
G C T A G C C G A T C G
NheI  (5712)
1 site
G C T A G C C G A T C G
KpnI  (4930)
1 site
G G T A C C C C A T G G
Acc65I  (4926)
1 site
G G T A C C C C A T G G
Bsu36I  (4922)
1 site
C C T N A G G G G A N T C C

Sticky ends from different Bsu36I sites may not be compatible.
PstI  (4806)
1 site
C T G C A G G A C G T C
SacII  (4704)
1 site
C C G C G G G G C G C C

Efficient cleavage requires at least two copies of the SacII recognition sequence.
NcoI  (4609)
1 site
C C A T G G G G T A C C
PflMI  (4442)
1 site
C C A N N N N N T G G G G T N N N N N A C C

Sticky ends from different PflMI sites may not be compatible.
MluI  (4188)
1 site
A C G C G T T G C G C A
SmaI  (4181)
1 site
C C C G G G G G G C C C

SmaI can be used at 37°C for brief incubations.
TspMI  (4179)
1 site
C C C G G G G G G C C C
XmaI  (4179)
1 site
C C C G G G G G G C C C

Cleavage may be enhanced when more than one copy of the XmaI recognition sequence is present.
FseI  (1150)
1 site
G G C C G G C C C C G G C C G G

FseI gradually loses activity when stored at -20°C.
BbvCI  (1424)
1 site
C C T C A G C G G A G T C G
Bpu10I  (1424)
1 site
C C T N A G C G G A N T C G

Cleavage may be enhanced when more than one copy of the Bpu10I recognition sequence is present.
This recognition sequence is asymmetric, so ligating sticky ends generated by Bpu10I will not always regenerate a Bpu10I site.
Sticky ends from different Bpu10I sites may not be compatible.
BstAPI  (1453)
1 site
G C A N N N N N T G C C G T N N N N N A C G

Sticky ends from different BstAPI sites may not be compatible.
AleI  (1577)
1 site
C A C N N N N G T G G T G N N N N C A C
KflI  (1934)
1 site
G G G W C C C C C C W G G G

Sticky ends from different KflI sites may not be compatible.
PpuMI  (1934)
1 site
R G G W C C Y Y C C W G G R

Sticky ends from different PpuMI sites may not be compatible.
BamHI  (2496)
1 site
G G A T C C C C T A G G

After cleavage, BamHI-HF® (but not the original BamHI) can remain bound to DNA and alter its electrophoretic mobility.
AgeI  (2508)
1 site
A C C G G T T G G C C A
SgrAI  (2508)
1 site
C R C C G G Y G G Y G G C C R C

Efficient cleavage requires at least two copies of the SgrAI recognition sequence.
BstZ17I  (2516)
1 site
G T A T A C C A T A T G
EcoRI  (2522)
1 site
G A A T T C C T T A A G
PaeR7I  (2893)
1 site
C T C G A G G A G C T C

PaeR7I does not recognize the sequence CTCTCGAG.
PspXI  (2893)
1 site
V C T C G A G B B G A G C T C V
XhoI  (2893)
1 site
C T C G A G G A G C T C
BstXI  (2915)
1 site
C C A N N N N N N T G G G G T N N N N N N A C C

Sticky ends from different BstXI sites may not be compatible.
BsmBI  (3168)
1 site
C G T C T C N G C A G A G N ( N ) 4

Sticky ends from different BsmBI sites may not be compatible.
BsmBI-v2 is an improved version of BsmBI.
Esp3I  (3168)
1 site
C G T C T C N G C A G A G N ( N ) 4

Sticky ends from different Esp3I sites may not be compatible.
SpeI  (3168)
1 site
A C T A G T T G A T C A
MscI  (3234)
1 site
T G G C C A A C C G G T
AscI  (3257)
1 site
G G C G C G C C C C G C G C G G
XbaI  (3444)
1 site
T C T A G A A G A T C T
BfuAI  (3998)
1 site
A C C T G C ( N ) 4 T G G A C G ( N ) 4 ( N ) 4

Efficient cleavage requires at least two copies of the BfuAI recognition sequence.
Sticky ends from different BfuAI sites may not be compatible.
BfuAI is typically used at 50°C, but is 50% active at 37°C.
BspMI  (3998)
1 site
A C C T G C ( N ) 4 T G G A C G ( N ) 4 ( N ) 4

Efficient cleavage requires at least two copies of the BspMI recognition sequence.
Sticky ends from different BspMI sites may not be compatible.
NdeI  (4020)
1 site
C A T A T G G T A T A C

Prolonged incubation with NdeI may lead to removal of additional nucleotides.
AmpR
6917 .. 7777  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
   Segment 2:  
   6917 .. 7708  =  792 bp
   263 amino acids  =  28.9 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
6917 .. 7777  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
   Segment 1:  signal sequence  
   7709 .. 7777  =  69 bp
   23 amino acids  =  2.6 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
6917 .. 7777  =  861 bp
286 amino acids  =  31.6 kDa
2 segments
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
Tet-On® 3G
3441 .. 4187  =  747 bp
248 amino acids  =  27.7 kDa
Product: modified rtTA protein that binds tightly to promoters containing the tet operator in the presence of doxycycline
Tet-On® 3G
3441 .. 4187  =  747 bp
248 amino acids  =  27.7 kDa
Product: modified rtTA protein that binds tightly to promoters containing the tet operator in the presence of doxycycline
3' LTR
1 .. 634  =  634 bp
3' long terminal repeat (LTR) from HIV-1
3' LTR
1 .. 634  =  634 bp
3' long terminal repeat (LTR) from HIV-1
3' LTR
4997 .. 5630  =  634 bp
3' long terminal repeat (LTR) from HIV-1
3' LTR
4997 .. 5630  =  634 bp
3' long terminal repeat (LTR) from HIV-1
WPRE
4201 .. 4789  =  589 bp
woodchuck hepatitis virus posttranscriptional regulatory element
WPRE
4201 .. 4789  =  589 bp
woodchuck hepatitis virus posttranscriptional regulatory element
ori
6161 .. 6746  =  586 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
6161 .. 6746  =  586 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
hPGK promoter
2912 .. 3422  =  511 bp
human phosphoglycerate kinase 1 promoter
hPGK promoter
2912 .. 3422  =  511 bp
human phosphoglycerate kinase 1 promoter
TRE3GS promoter
2528 .. 2895  =  368 bp
3rd-generation Tet-responsive promoter that can be activated by binding of Tet-On® 3G, modified to eliminate binding sites for endogenous mammalian transcription factors
TRE3GS promoter
2528 .. 2895  =  368 bp
3rd-generation Tet-responsive promoter that can be activated by binding of Tet-On® 3G, modified to eliminate binding sites for endogenous mammalian transcription factors
RRE
1303 .. 1536  =  234 bp
The Rev response element (RRE) of HIV-1 allows for Rev-dependent mRNA export from the nucleus to the cytoplasm.
RRE
1303 .. 1536  =  234 bp
The Rev response element (RRE) of HIV-1 allows for Rev-dependent mRNA export from the nucleus to the cytoplasm.
SV40 poly(A) signal
2187 .. 2321  =  135 bp
SV40 polyadenylation signal
SV40 poly(A) signal
2187 .. 2321  =  135 bp
SV40 polyadenylation signal
SV40 poly(A) signal
7930 .. 8064  =  135 bp
SV40 polyadenylation signal
SV40 poly(A) signal
7930 .. 8064  =  135 bp
SV40 polyadenylation signal
HIV-1 Ψ
681 .. 806  =  126 bp
packaging signal of human immunodeficiency virus type 1
HIV-1 Ψ
681 .. 806  =  126 bp
packaging signal of human immunodeficiency virus type 1
cPPT/CTS
2028 .. 2144  =  117 bp
central polypurine tract and central termination sequence of HIV-1 (lacking the first T)
cPPT/CTS
2028 .. 2144  =  117 bp
central polypurine tract and central termination sequence of HIV-1 (lacking the first T)
AmpR promoter
7778 .. 7882  =  105 bp
AmpR promoter
7778 .. 7882  =  105 bp
MCS
2496 .. 2527  =  32 bp
multiple cloning site
MCS
2496 .. 2527  =  32 bp
multiple cloning site
tet operator
2653 .. 2671  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2653 .. 2671  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2689 .. 2707  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2689 .. 2707  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2725 .. 2743  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2725 .. 2743  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2761 .. 2779  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2761 .. 2779  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2797 .. 2815  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2797 .. 2815  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2833 .. 2851  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2833 .. 2851  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2869 .. 2887  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
2869 .. 2887  =  19 bp
bacterial operator O2 for the tetR and tetA genes
ORF:  3598 .. 3900  =  303 bp
ORF:  100 amino acids  =  11.1 kDa
ORF:  4108 .. 4818  =  711 bp
ORF:  236 amino acids  =  25.8 kDa
ORF:  1181 .. 2032  =  852 bp
ORF:  283 amino acids  =  32.7 kDa
ORF:  4304 .. 4600  =  297 bp
ORF:  98 amino acids  =  10.2 kDa
ORF:  3204 .. 4187  =  984 bp
ORF:  327 amino acids  =  36.0 kDa
ORF:  7047 .. 7313  =  267 bp
ORF:  88 amino acids  =  9.2 kDa
ORF:  2595 .. 2864  =  270 bp
ORF:  89 amino acids  =  10.5 kDa
ORF:  3893 .. 4174  =  282 bp
ORF:  93 amino acids  =  9.6 kDa
ORF:  6917 .. 7777  =  861 bp
ORF:  286 amino acids  =  31.6 kDa
ORF:  1015 .. 1476  =  462 bp
ORF:  153 amino acids  =  16.6 kDa
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Download pLVX-TetOne.dna file

SnapGene

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Individual Sequences & Maps

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