pRetroX-TRE3G

Retroviral vector for doxycycline-inducible expression of a gene in cells containing the Tet-On® 3G transactivator protein.

Sequence Author: Clontech (TaKaRa)

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HomePlasmidsViral Expression & Packaging VectorspRetroX-TRE3G
CMV enhancer SspI (6255) XmnI (6050) ScaI (5931) PvuI (5821) FspI (5673) PciI (4558) BspQI - SapI (4442) AvrII (4311) SfiI (4264) AccI (3430) SalI (3429) BmtI (3340) NheI (3336) BtgZI (279) SnaBI (285) AscI (543) PshAI (677) AfeI (1089) BglII (1577) PspXI (1605) BamHI (1958) BspDI - ClaI (1965) MluI (1970) NotI (1977) MreI - NgoMIV - SgrAI (1984) NaeI (1986) PspOMI (1990) ApaI (1994) EcoRI (1996) AgeI (2116) BlpI (2279) BsmI (2437) BfuAI - BspMI (2515) BsiWI (2582) RsrII (2642) SacII (2740) DraIII (3097) EcoRV (3194) PvuII (3237) pRetroX-TRE3G 6600 bp
SspI  (6255)
1 site		 A A T A T T T T A T A A
XmnI  (6050)
1 site		 G A A N N N N T T C C T T N N N N A A G
ScaI  (5931)
1 site		 A G T A C T T C A T G A
PvuI  (5821)
1 site		 C G A T C G G C T A G C
FspI  (5673)
1 site		 T G C G C A A C G C G T
PciI  (4558)
1 site		 A C A T G T T G T A C A
PciI is inhibited by nonionic detergents.
BspQI  (4442)
1 site		 G C T C T T C N C G A G A A G N N N N
Sticky ends from different BspQI sites may not be compatible.
SapI  (4442)
1 site		 G C T C T T C N C G A G A A G N N N N
Sticky ends from different SapI sites may not be compatible.
SapI gradually settles in solution, so a tube of SapI should be mixed before removing an aliquot.
AvrII  (4311)
1 site		 C C T A G G G G A T C C
SfiI  (4264)
1 site		 G G C C N N N N N G G C C C C G G N N N N N C C G G
Efficient cleavage requires at least two copies of the SfiI recognition sequence.
Sticky ends from different SfiI sites may not be compatible.
AccI  (3430)
1 site		 G T M K A C C A K M T G
Efficient cleavage with AccI requires ≥13 bp on each side of the recognition sequence.
Sticky ends from different AccI sites may not be compatible.
SalI  (3429)
1 site		 G T C G A C C A G C T G
BmtI  (3340)
1 site		 G C T A G C C G A T C G
NheI  (3336)
1 site		 G C T A G C C G A T C G
BtgZI  (279)
1 site		 G C G A T G ( N ) 10 C G C T A C ( N ) 10 ( N ) 4
Sticky ends from different BtgZI sites may not be compatible.
After cleavage, BtgZI can remain bound to DNA and alter its electrophoretic mobility.
BtgZI is typically used at 60°C, but is 75% active at 37°C.
SnaBI  (285)
1 site		 T A C G T A A T G C A T
AscI  (543)
1 site		 G G C G C G C C C C G C G C G G
PshAI  (677)
1 site		 G A C N N N N G T C C T G N N N N C A G
PshAI quickly loses activity at 37°C, but can be used at 25°C for long incubations.
AfeI  (1089)
1 site		 A G C G C T T C G C G A
BglII  (1577)
1 site		 A G A T C T T C T A G A
PspXI  (1605)
1 site		 V C T C G A G B B G A G C T C V
BamHI  (1958)
1 site		 G G A T C C C C T A G G
After cleavage, BamHI-HF® (but not the original BamHI) can remain bound to DNA and alter its electrophoretic mobility.
BspDI  (1965)
1 site		 A T C G A T T A G C T A
ClaI  (1965)
1 site		 A T C G A T T A G C T A
MluI  (1970)
1 site		 A C G C G T T G C G C A
NotI  (1977)
1 site		 G C G G C C G C C G C C G G C G
MreI  (1984)
1 site		 C G C C G G C G G C G G C C G C
NgoMIV  (1984)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NgoMIV recognition sequence.
SgrAI  (1984)
1 site		 C R C C G G Y G G Y G G C C R C
Efficient cleavage requires at least two copies of the SgrAI recognition sequence.
NaeI  (1986)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NaeI recognition sequence.
PspOMI  (1990)
1 site		 G G G C C C C C C G G G
ApaI  (1994)
1 site		 G G G C C C C C C G G G
ApaI can be used between 25°C and 37°C.
EcoRI  (1996)
1 site		 G A A T T C C T T A A G
AgeI  (2116)
1 site		 A C C G G T T G G C C A
BlpI  (2279)
1 site		 G C T N A G C C G A N T C G
Sticky ends from different BlpI sites may not be compatible.
BsmI  (2437)
1 site		 G A A T G C N C T T A C G N
Sticky ends from different BsmI sites may not be compatible.
BfuAI  (2515)
1 site		 A C C T G C ( N ) 4 T G G A C G ( N ) 4 ( N ) 4
Efficient cleavage requires at least two copies of the BfuAI recognition sequence.
Sticky ends from different BfuAI sites may not be compatible.
BfuAI is typically used at 50°C, but is 50% active at 37°C.
BspMI  (2515)
1 site		 A C C T G C ( N ) 4 T G G A C G ( N ) 4 ( N ) 4
Efficient cleavage requires at least two copies of the BspMI recognition sequence.
Sticky ends from different BspMI sites may not be compatible.
BsiWI  (2582)
1 site		 C G T A C G G C A T G C
BsiWI is typically used at 55°C, but is 50% active at 37°C.
RsrII  (2642)
1 site		 C G G W C C G G C C W G G C
Efficient cleavage requires at least two copies of the RsrII recognition sequence.
Sticky ends from different RsrII sites may not be compatible.
For full activity, add fresh DTT.
SacII  (2740)
1 site		 C C G C G G G G C G C C
Efficient cleavage requires at least two copies of the SacII recognition sequence.
DraIII  (3097)
1 site		 C A C N N N G T G G T G N N N C A C
Sticky ends from different DraIII sites may not be compatible.
EcoRV  (3194)
1 site		 G A T A T C C T A T A G
EcoRV is reportedly more prone than its isoschizomer Eco32I to delete a base after cleavage.
PvuII  (3237)
1 site		 C A G C T G G T C G A C
AmpR
5378 .. 6238  =  861 bp
286 amino acids  =  31.5 kDa
2 segments
   Segment 2:  
   5378 .. 6169  =  792 bp
   263 amino acids  =  28.9 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
5378 .. 6238  =  861 bp
286 amino acids  =  31.5 kDa
2 segments
   Segment 1:  signal sequence  
   6170 .. 6238  =  69 bp
   23 amino acids  =  2.6 kDa
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
AmpR
5378 .. 6238  =  861 bp
286 amino acids  =  31.5 kDa
2 segments
Product: β-lactamase
confers resistance to ampicillin, carbenicillin, and related antibiotics
PuroR
2526 .. 3125  =  600 bp
199 amino acids  =  21.5 kDa
Product: puromycin N-acetyltransferase
confers resistance to puromycin
PuroR
2526 .. 3125  =  600 bp
199 amino acids  =  21.5 kDa
Product: puromycin N-acetyltransferase
confers resistance to puromycin
ori
4619 .. 5207  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
4619 .. 5207  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
PGK promoter
2006 .. 2505  =  500 bp
mouse phosphoglycerate kinase 1 promoter
PGK promoter
2006 .. 2505  =  500 bp
mouse phosphoglycerate kinase 1 promoter
3' LTR (ΔU3)
3306 .. 3731  =  426 bp
self-inactivating 3' long terminal repeat (LTR) from Moloney murine leukemia virus
3' LTR (ΔU3)
3306 .. 3731  =  426 bp
self-inactivating 3' long terminal repeat (LTR) from Moloney murine leukemia virus
gag (truncated)
1152 .. 1568  =  417 bp
truncated MMLV gag gene lacking the start codon
gag (truncated)
1152 .. 1568  =  417 bp
truncated MMLV gag gene lacking the start codon
CMV enhancer
6529 .. 309  =  381 bp
human cytomegalovirus immediate early enhancer
CMV enhancer
6529 .. 309  =  381 bp
human cytomegalovirus immediate early enhancer
TRE3GV promoter
1611 .. 1957  =  347 bp
3rd-generation Tet-responsive promoter that can be activated by binding of Tet-On 3G; optimized for retroviral and lentiviral vectors
TRE3GV promoter
1611 .. 1957  =  347 bp
3rd-generation Tet-responsive promoter that can be activated by binding of Tet-On 3G; optimized for retroviral and lentiviral vectors
SV40 promoter
3997 .. 4326  =  330 bp
SV40 enhancer and early promoter
SV40 promoter
3997 .. 4326  =  330 bp
SV40 enhancer and early promoter
CMV promoter
310 .. 513  =  204 bp
human cytomegalovirus (CMV) immediate early promoter
CMV promoter
310 .. 513  =  204 bp
human cytomegalovirus (CMV) immediate early promoter
MMLV Ψ
752 .. 951  =  200 bp
packaging signal of Moloney murine leukemia virus (MMLV)
MMLV Ψ
752 .. 951  =  200 bp
packaging signal of Moloney murine leukemia virus (MMLV)
5' LTR (truncated)
514 .. 689  =  176 bp
truncated long terminal repeat from Moloney murine sarcoma virus
5' LTR (truncated)
514 .. 689  =  176 bp
truncated long terminal repeat from Moloney murine sarcoma virus
AmpR promoter
6239 .. 6343  =  105 bp
AmpR promoter
6239 .. 6343  =  105 bp
MCS
1958 .. 2001  =  44 bp
multiple cloning site
MCS
1958 .. 2001  =  44 bp
multiple cloning site
SV40 ori
4177 .. 4312  =  136 bp
SV40 origin of replication
SV40 ori
4177 .. 4312  =  136 bp
SV40 origin of replication
tet operator
1616 .. 1634  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1616 .. 1634  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1652 .. 1670  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1652 .. 1670  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1688 .. 1706  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1688 .. 1706  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1724 .. 1742  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1724 .. 1742  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1760 .. 1778  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1760 .. 1778  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1796 .. 1814  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1796 .. 1814  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1832 .. 1850  =  19 bp
bacterial operator O2 for the tetR and tetA genes
tet operator
1832 .. 1850  =  19 bp
bacterial operator O2 for the tetR and tetA genes
ORF:  1585 .. 1866  =  282 bp
ORF:  93 amino acids  =  11.1 kDa
ORF:  2286 .. 3125  =  840 bp
ORF:  279 amino acids  =  30.1 kDa
ORF:  5508 .. 5774  =  267 bp
ORF:  88 amino acids  =  9.2 kDa
ORF:  2451 .. 3176  =  726 bp
ORF:  241 amino acids  =  24.8 kDa
ORF:  3555 .. 3845  =  291 bp
ORF:  96 amino acids  =  10.5 kDa
ORF:  839 .. 1099  =  261 bp
ORF:  86 amino acids  =  9.5 kDa
ORF:  1838 .. 2113  =  276 bp
ORF:  91 amino acids  =  10.5 kDa
ORF:  5378 .. 6238  =  861 bp
ORF:  286 amino acids  =  31.5 kDa
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Individual Sequences & Maps

pAAV-AC-GFP
pLenti6.2 N-Lumio V5-DEST
pLVX-rHom-1
pRetroX-Tet3G
pAAV-AC-Myc-DDK
pLenti6.2 V5-DEST
pLVX-rHom-Nuc1
pRetroX-TetOne
pAAV-AC-RFP
pLenti6.3 TO V5-DEST
pLVX-rHom-Sec1
pRetroX-TetOne-Puro
pAAV2-EF1a-tGFP-WPRE
pLenti6.3 V5-DEST
pLVX-Tet-Off Advanced
pRetroX-Tight-Hyg
pAd BLOCK-iT-DEST
pLenti6.4 R4R2 V5-DEST
pLVX-Tet-On Advanced
pRetroX-Tight-Pur
pAd CMV V5-DEST
pLenti6 BLOCK-iT-DEST
pLVX-Tet3G
pRetroX-TRE3G
pAd PL-DEST
pLenti6 capTEV-CT-DEST
pLVX-TetOne
pRFP-C-RS
pAdenoX-CMV Linear
pLenti6 capTEV-NT-DEST1
pLVX-TetOne-Puro
pRFP-CB-shLenti
pAdenoX-DsRed-Express Linear
pLenti6 TR
pLVX-Tight-Puro
pRS
pAdenoX-PRLS Linear
pLenti6 UbC V5-DEST
pLVX-TRE3G
pRSGC1-U6-sg-HTS6-CMV-Cas9-2A-Puro
pAdenoX-PRLS-DsRed-Express Linear
pLenti6 V5-DEST
pLVX-TRE3G-Hom1
pRSGC2-U6-sg-HTS6-UbiC-Cas9-2A-Puro
pAdenoX-PRLS-ZsGreen1 Linear
pLenti7.3 V5-DEST
pLVX-TRE3G-IRES
pRSI12-U6-sh-HTS4-UbiC-TagRFP-2A-Puro
pAdenoX-Tet3G Linear
pLEX-MCS
pLVX-TRE3G-mCherry
pRSI16cb-U6-sh-13kCB18-HTS6-UbiC-TagRFP-2A-Puro
pAdenoX-ZsGreen1 Linear
pLHCX
pLVX-TRE3G-ZsGreen1
pRSI16-U6-sh-HTS6-UbiC-TagRFP-2A-Puro
pB-RS
pLKO.1
pLX301
pRSI17cb-U6-sh-13kCB18-HTS6-UbiC-TagGFP2-2A-Puro
pBABE-Hygro
pLKO.1 puro
pLX302
pRSI17-U6-sh-HTS6-UbiC-TagGFP2-2A-Puro
pBABE-Neo
pLMN-ZsGreen-Neomycin
pLX303
pRSIT12-U6Tet-sh-HTS4-CMV-TetRep-2A-TagRFP-2A-Puro
pBABE-Puro
pLMPd-Ametrine
pLX304
pRSIT16-U6Tet-sh-HTS6-CMV-TetRep-2A-TagRFP-2A-Puro
pBABE-Zeo
pLNCX2
pLX304-V5-Blast-Empty
pRSIT17-U6Tet-sh-HTS6-CMV-TetRep-2A-TagGFP2-2A-Puro
pCMV-VSV-G
pLP VSVG
pLXIN
pRSITEP-U6Tet-sh-noHTS-EF1-TetRep-2A-Puro
pGFP-B-RS
pLP1
pLXSN
pRSITUR-U6Tet-sh-HTS3-UbiC-TetRep-2A-TagRFP
pGFP-C-shLenti
pLP2
pMD2.G
pShuttle2
pGFP-V-RS
pLPCX
pMSCV16URP-U6-sh-HTS6-UbiC-TagRFP-2A-Puro
pSIREN-RetroQ
pGIPZ
pLVX-EF1alpha-IRES-mCherry
pMSCVhyg
pSIREN-RetroQ-DsRed-Express
pLenti-C-GFP
pLVX-EF1alpha-IRES-Puro
pMSCVneo
pSIREN-RetroQ-TetH
pLenti-C-mGFP
pLVX-EF1alpha-IRES-ZsGreen1
pMSCVpuro
pSIREN-RetroQ-TetP
pLenti-C-Myc-DDK
pLVX-EF1alpha-Tet3G
pQC-tTS-IN
pSIREN-RetroQ-ZsGreen1
pLenti-C-Myc-DDK-IRES-BSD
pLVX-Het-1
pQCXIH
psPAX2
pLenti-C-Myc-DDK-IRES-GFP
pLVX-Het-2
pQCXIN
pTRE3G-Hom1
pLenti-C-Myc-DDK-IRES-Neo
pLVX-Het-Mem1
pQCXIP
pTRIPZ
pLenti-C-Myc-DDK-IRES-Puro
pLVX-Het-Nuc1
pQCXIX
ptTS-Neo
pLenti-C-Myc-DDK-IRES-tRFP
pLVX-Hom-1
pRetro-Lib
pZIP-hCMV-RFP-Puro
pLenti-C-tRFP
pLVX-Hom-Mem1
pRetroQ-AcGFP1-C1
pZIP-hCMV-ZSGreen-Puro
pLenti-C-tYFP
pLVX-Hom-Nuc1
pRetroQ-AcGFP1-N1
pZIP-hEF1-alpha-RFP-Puro
pLenti-EF1a-C-mGFP
pLVX-IRES-Hyg
pRetroQ-DsRed-Monomer-C1
pZIP-hEF1-alpha-ZsGreen-Puro
pLenti-EF1a-C-Myc-DDK-IRES-Puro
pLVX-IRES-mCherry
pRetroQ-DsRed-Monomer-N1
pZIP-mCMV-RFP-Puro
pLenti-EF1a-C-tGFP
pLVX-IRES-Neo
pRetroQ-mCherry-C1
pZIP-mCMV-ZsGreen-Puro
pLenti-N-tGFP
pLVX-IRES-Puro
pRetroQ-mCherry-N1
pZIP-mEF1-alpha-RFP-Puro
pLenti-N-tRFP
pLVX-IRES-tdTomato
pRetroX-IRES-DsRedExpress
pZIP-mEF1-alpha-ZsGreen-Puro
pLenti-N-tYFP
pLVX-IRES-ZsGreen1
pRetroX-IRES-ZsGreen1
pZIP-SFFV-RFP-Puro
pLenti3.3 TR
pLVX-PTuner
pRetroX-PTuner
pZIP-SFFV-ZsGreen-Puro
pLenti4 BLOCK-iT-DEST
pLVX-PTuner Green
pRetroX-PTuner IRES
pZIP-TRE3G-ZsGreen-Puro
pLenti4 V5-DEST
pLVX-PTunerC
pRetroX-Tet-Off Advanced
pSIREN-Shuttle (linearized)
pLenti6.2 C-Lumio V5-DEST
pLVX-Puro
pRetroX-Tet-On Advanced
scramble shRNA

Plasmid Sets

Basic Cloning Vectors
I.M.A.G.E. Consortium Plasmids
pET & Duet Vectors (Novagen)
TA and GC Cloning Vectors
Coronavirus Resources
Insect Cell Vectors
pGEX Vectors (GE Healthcare)
TOPO Cloning Vectors
CRISPR Plasmids
Luciferase Vectors
Plant Vectors
Viral Expression & Packaging Vectors
Fluorescent Protein Genes & Plasmids
Lucigen Vectors
Qiagen Vectors
Yeast Plasmids
Gateway® Cloning Vectors
Mammalian Expression Vectors
Structural Genomics Vectors

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