pSF-CMV-FMDV-RLuc

Mammalian vector for co-expressing a gene together with Renilla luciferase expressed from the foot-and-mouth disease virus IRES.

Sequence Author: Oxford Genetics

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HomePlasmidsLuciferase VectorspSF-CMV-FMDV-RLuc
PmeI (5531) RsrII (5224) BsrDI (4941) PflFI - Tth111I (4826) PmeI (4483) SanDI (4417) AscI (4326) FseI (4180) NaeI (4178) NgoMIV (4176) SwaI (4074) BspHI (3905) AlwNI (3601) BssSI (3358) SwaI (3181) PacI (3055) 3' β-globin insulator PstI - SbfI (2923) AsiSI - PvuI (5) BglII (232) CMV enhancer SnaBI (566) BglII (816) NotI (858) Eco53kI (879) SacI (881) EcoRI (885) NcoI (905) EcoRV (921) AbsI - PaeR7I - PspXI - XhoI (928) BsgI (940) BspDI - ClaI (977) EcoNI (1011) PspOMI (1226) ApaI (1230) PflMI (1308) AleI (1309) AhdI (1438) BstAPI (1661) AanI (1765) NheI (2407) BmtI (2411) stop codons AanI (2557) HpaI (2577) MfeI (2586) pSF-CMV-FMDV-RLuc 5650 bp
PmeI  (5531)
2 sites		 G T T T A A A C C A A A T T T G
RsrII  (5224)
1 site		 C G G W C C G G C C W G G C
Efficient cleavage requires at least two copies of the RsrII recognition sequence.
Sticky ends from different RsrII sites may not be compatible.
For full activity, add fresh DTT.
BsrDI  (4941)
1 site		 G C A A T G N N C G T T A C
Sticky ends from different BsrDI sites may not be compatible.
PflFI  (4826)
1 site		 G A C N N N G T C C T G N N N C A G
The 1-base overhangs produced by PflFI may be hard to ligate.
Sticky ends from different PflFI sites may not be compatible.
Tth111I  (4826)
1 site		 G A C N N N G T C C T G N N N C A G
The 1-base overhangs produced by Tth111I may be hard to ligate.
Sticky ends from different Tth111I sites may not be compatible.
PmeI  (4483)
2 sites		 G T T T A A A C C A A A T T T G
SanDI  (4417)
1 site		 G G G W C C C C C C W G G G
Sticky ends from different SanDI sites may not be compatible.
AscI  (4326)
1 site		 G G C G C G C C C C G C G C G G
FseI  (4180)
1 site		 G G C C G G C C C C G G C C G G
FseI gradually loses activity when stored at -20°C.
NaeI  (4178)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NaeI recognition sequence.
NgoMIV  (4176)
1 site		 G C C G G C C G G C C G
Efficient cleavage requires at least two copies of the NgoMIV recognition sequence.
SwaI  (4074)
2 sites		 A T T T A A A T T A A A T T T A
SwaI is typically used at 25°C, but is 50% active at 37°C.
BspHI  (3905)
1 site		 T C A T G A A G T A C T
AlwNI  (3601)
1 site		 C A G N N N C T G G T C N N N G A C
Sticky ends from different AlwNI sites may not be compatible.
BssSI  (3358)
1 site		 C A C G A G G T G C T C
SwaI  (3181)
2 sites		 A T T T A A A T T A A A T T T A
SwaI is typically used at 25°C, but is 50% active at 37°C.
PacI  (3055)
1 site		 T T A A T T A A A A T T A A T T
PstI  (2923)
1 site		 C T G C A G G A C G T C
SbfI  (2923)
1 site		 C C T G C A G G G G A C G T C C
AsiSI  (5)
1 site		 G C G A T C G C C G C T A G C G
PvuI  (5)
1 site		 C G A T C G G C T A G C
BglII  (232)
2 sites		 A G A T C T T C T A G A
SnaBI  (566)
1 site		 T A C G T A A T G C A T
BglII  (816)
2 sites		 A G A T C T T C T A G A
NotI  (858)
1 site		 G C G G C C G C C G C C G G C G
Eco53kI  (879)
1 site		 G A G C T C C T C G A G
SacI  (881)
1 site		 G A G C T C C T C G A G
EcoRI  (885)
1 site		 G A A T T C C T T A A G
NcoI  (905)
1 site		 C C A T G G G G T A C C
EcoRV  (921)
1 site		 G A T A T C C T A T A G
EcoRV is reportedly more prone than its isoschizomer Eco32I to delete a base after cleavage.
AbsI  (928)
1 site		 C C T C G A G G G G A G C T C C
PaeR7I  (928)
1 site		 C T C G A G G A G C T C
PaeR7I does not recognize the sequence CTCTCGAG.
PspXI  (928)
1 site		 V C T C G A G B B G A G C T C V
XhoI  (928)
1 site		 C T C G A G G A G C T C
BsgI  (940)
1 site		 G T G C A G ( N ) 14 N N C A C G T C ( N ) 14
Efficient cleavage requires at least two copies of the BsgI recognition sequence.
Sticky ends from different BsgI sites may not be compatible.
For full activity, add fresh S-adenosylmethionine (SAM).
BspDI  (977)
1 site		 A T C G A T T A G C T A
ClaI  (977)
1 site		 A T C G A T T A G C T A
EcoNI  (1011)
1 site		 C C T N N N N N A G G G G A N N N N N T C C
The 1-base overhangs produced by EcoNI may be hard to ligate.
Sticky ends from different EcoNI sites may not be compatible.
PspOMI  (1226)
1 site		 G G G C C C C C C G G G
ApaI  (1230)
1 site		 G G G C C C C C C G G G
ApaI can be used between 25°C and 37°C.
PflMI  (1308)
1 site		 C C A N N N N N T G G G G T N N N N N A C C
Sticky ends from different PflMI sites may not be compatible.
AleI  (1309)
1 site		 C A C N N N N G T G G T G N N N N C A C
AhdI  (1438)
1 site		 G A C N N N N N G T C C T G N N N N N C A G
The 1-base overhangs produced by AhdI may be hard to ligate.
Sticky ends from different AhdI sites may not be compatible.
BstAPI  (1661)
1 site		 G C A N N N N N T G C C G T N N N N N A C G
Sticky ends from different BstAPI sites may not be compatible.
AanI  (1765)
2 sites		 T T A T A A A A T A T T
NheI  (2407)
1 site		 G C T A G C C G A T C G
BmtI  (2411)
1 site		 G C T A G C C G A T C G
AanI  (2557)
2 sites		 T T A T A A A A T A T T
HpaI  (2577)
1 site		 G T T A A C C A A T T G
MfeI  (2586)
1 site		 C A A T T G G T T A A C
RLuc
1473 .. 2411  =  939 bp
312 amino acids  =  36.1 kDa
Product: Renilla luciferase
codon-optimized synthetic gene
RLuc
1473 .. 2411  =  939 bp
312 amino acids  =  36.1 kDa
Product: Renilla luciferase
codon-optimized synthetic gene
NeoR/KanR
4580 .. 5374  =  795 bp
264 amino acids  =  29.0 kDa
Product: aminoglycoside phosphotransferase from Tn5
confers resistance to neomycin, kanamycin, and G418 (Geneticin®)
NeoR/KanR
4580 .. 5374  =  795 bp
264 amino acids  =  29.0 kDa
Product: aminoglycoside phosphotransferase from Tn5
confers resistance to neomycin, kanamycin, and G418 (Geneticin®)
ori
3246 .. 3834  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
ori
3246 .. 3834  =  589 bp
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
IRES
1012 .. 1457  =  446 bp
internal ribosome entry site (IRES) of the foot-and-mouth disease virus (FMDV)
IRES
1012 .. 1457  =  446 bp
internal ribosome entry site (IRES) of the foot-and-mouth disease virus (FMDV)
CMV enhancer
287 .. 590  =  304 bp
human cytomegalovirus immediate early enhancer
CMV enhancer
287 .. 590  =  304 bp
human cytomegalovirus immediate early enhancer
CMV promoter
591 .. 794  =  204 bp
human cytomegalovirus (CMV) immediate early promoter
CMV promoter
591 .. 794  =  204 bp
human cytomegalovirus (CMV) immediate early promoter
rrnG terminator
2768 .. 2904  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
2768 .. 2904  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
5387 .. 5523  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
rrnG terminator
5387 .. 5523  =  137 bp
transcription terminator from the E. coli ribosomal RNA rrnG operon (Albrechtsen et al., 1991)
SV40 poly(A) signal
2456 .. 2577  =  122 bp
SV40 polyadenylation signal
SV40 poly(A) signal
2456 .. 2577  =  122 bp
SV40 polyadenylation signal
MCS
857 .. 942  =  86 bp
multiple cloning site
MCS
857 .. 942  =  86 bp
multiple cloning site
5' β-globin insulator
18 .. 89  =  72 bp
insulator upstream of the human β-globin locus (Farrell et al., 2002)
5' β-globin insulator
18 .. 89  =  72 bp
insulator upstream of the human β-globin locus (Farrell et al., 2002)
3' β-globin insulator
2949 .. 3020  =  72 bp
insulator downstream of the human β-globin locus (Farrell et al., 2002)
3' β-globin insulator
2949 .. 3020  =  72 bp
insulator downstream of the human β-globin locus (Farrell et al., 2002)
T7 terminator
2692 .. 2738  =  47 bp
transcription terminator for bacteriophage T7 RNA polymerase
T7 terminator
2692 .. 2738  =  47 bp
transcription terminator for bacteriophage T7 RNA polymerase
stop codons
961 .. 971  =  11 bp
stop codons in all three reading frames
stop codons
961 .. 971  =  11 bp
stop codons in all three reading frames
stop codons
2414 .. 2424  =  11 bp
stop codons in all three reading frames
stop codons
2414 .. 2424  =  11 bp
stop codons in all three reading frames
RBS
4567 .. 4572  =  6 bp
Shine-Dalgarno ribosome binding site
RBS
4567 .. 4572  =  6 bp
Shine-Dalgarno ribosome binding site
Kozak sequence
903 .. 909  =  7 bp
Kozak sequence
903 .. 909  =  7 bp
RBS
893 .. 898  =  6 bp
Shine-Dalgarno ribosome binding site
RBS
893 .. 898  =  6 bp
Shine-Dalgarno ribosome binding site
ATG
907 .. 909  =  3 bp
1 amino acid  =  149.2 Da
Product: start codon
ATG
907 .. 909  =  3 bp
1 amino acid  =  149.2 Da
Product: start codon
ORF:  4580 .. 5374  =  795 bp
ORF:  264 amino acids  =  29.0 kDa
ORF:  1473 .. 2411  =  939 bp
ORF:  312 amino acids  =  36.1 kDa
ORF:  2793 .. 3224  =  432 bp
ORF:  143 amino acids  =  16.3 kDa
ORF:  4752 .. 5138  =  387 bp
ORF:  128 amino acids  =  14.7 kDa
ORF:  5412 .. 196  =  435 bp
ORF:  144 amino acids  =  16.1 kDa
ORF:  1009 .. 1236  =  228 bp
ORF:  75 amino acids  =  8.4 kDa
ORF:  1389 .. 2327  =  939 bp
ORF:  312 amino acids  =  37.2 kDa
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Individual Sequences & Maps

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pGL4.23[luc2 minP]
pGL4.82[hRluc Puro]
pRL-SV40
pBIND-GR
pGL4.24[luc2P minP]
pGL4.83[hRlucP Puro]
pRL-TK
pCBG68-Basic
pGL4.25[luc2CP minP]
pGL4.84[hRlucCP Puro]
pSELECT-zeo-Lucia
pCBG68-Control
pGL4.26[luc2 minP Hygro]
pGLuc Mini-TK 2
pSF-CMV-EMCV-FLuc
pCBG99-Basic
pGL4.27[luc2P minP Hygro]
pGLuc-Basic 2
pSF-CMV-EMCV-RLuc
pCBG99-Control
pGL4.28[luc2CP minP Hygro]
phRG-B
pSF-CMV-FLuc
pCBR-Basic
pGL4.29[luc2P CRE Hygro]
phRG-TK
pSF-CMV-FMDV-FLuc
pCBR-Control
pGL4.30[luc2P NFAT-RE Hygro]
phRL-CMV
pSF-CMV-FMDV-RLuc
pCLuc Mini-TK 2
pGL4.31[luc2P GAL4UAS Hygro]
phRL-null
pSF-CMV-PGK-FLuc
pCLuc-Basic 2
pGL4.32[luc2P NF-kB-RE Hygro]
phRL-SV40
pSF-CMV-PGK-RLuc
pCMV-CLuc 2
pGL4.33[luc2P SRE Hygro]
phRL-TK
pSF-CMV-RLuc
pCMV-Cypridina Luc
pGL4.34[luc2P SRF-RE Hygro]
phRL-TK(Int-)
pSF-CMV-RSV-FLuc AscI
pCMV-Gaussia Luc
pGL4.35[luc2P 9XGAL4UAS Hygro]
pLightSwitch_Prom
pSF-CMV-RSV-RLuc AscI
pCMV-Gaussia-Dura Luc
pGL4.36[luc2P MMTV Hygro]
pLVX-MetLuc Control
pSF-CMV-Ub-FLuc AscI
pCMV-GLuc 2
pGL4.37[luc2P ARE Hygro]
pLVX-MetLuc Reporter
pSF-CMV-Ub-RLuc AscI
pCMV-Green Renilla Luc
pGL4.38[luc2P p53 RE Hygro]
pMCS-Cypridina Luc
pSF-CMVe-FLuc
pCMV-Red Firefly Luc
pGL4.39[luc2P ATF6 RE Hygro]
pMCS-Gaussia Luc
pSF-CMVe-RLuc
pCRE-MetLuc2-Reporter
pGL4.40[luc2P MRE Hygro]
pMCS-Gaussia-Dura Luc
pSF-MinProm-FLuc
pFN26A (BIND) hRluc-neo Flexi Vector
pGL4.41[luc2P HSE Hygro]
pMCS-Green Renilla Luc
pSF-MinProm-RLuc
pGEM-luc
pGL4.42[luc2P HRE Hygro]
pMCS-Red Firefly Luc
pSF-pA-CMVe-FLuc
pGL2-Basic
pGL4.43[luc2P XRE Hygro]
pMetLuc-Mem Control
pSF-pA-CMVe-RLuc
pGL2-Control
pGL4.44[luc2P AP1 RE Hygro]
pMetLuc-Mem Reporter
pSF-pA-MinProm-FLuc
pGL2-Enhancer
pGL4.45[luc2P ISRE Hygro]
pMetLuc2-Control
pSF-pA-MinProm-RLuc
pGL2-Promoter
pGL4.47[luc2P SIE Hygro]
pMetLuc2-Reporter
pSF-pA-PromMCS-FLuc
pGL3-Basic
pGL4.48[luc2P SBE Hygro]
pmirGLO
pSF-pA-PromMCS-RLuc
pGL3-Control
pGL4.49[luc2P TCF-LEF RE Hygro]
pMirTarget
pSF-PromMCS-FLuc
pGL3-Enhancer
pGL4.50[luc2 CMV Hygro]
pNFkB-MetLuc2-Reporter
pSF-PromMCS-RLuc
pGL3-Promoter
pGL4.51[luc2 CMV Neo]
pNL1.1.CMV[Nluc CMV]
pSF-RecA-FLuc
pGL4.10[luc2]
pGL4.52[luc2P STAT5 RE Hygro]
pNL1.1[Nluc]
pSP-luc+NF
pGL4.11[luc2P]
pGL4.70[hRluc]
pNL1.2[NlucP]
pSV40-CLuc
pGL4.12[luc2CP]
pGL4.71[hRlucP]
pNL1.3.CMV[secNluc CMV]
pSV40-GLuc
pGL4.13[luc2 SV40]
pGL4.72[hRlucCP]
pNL1.3[secNluc]
pTK-CLuc
pGL4.14[luc2 Hygro]
pGL4.73[hRluc SV40]
pNL2.1[Nluc Hygro]
pTK-Cypridina Luc
pGL4.15[luc2P Hygro]
pGL4.74[hRluc TK]
pNL2.2[NlucP Hygro]
pTK-Gaussia Luc
pGL4.16[luc2CP Hygro]
pGL4.75[hRluc CMV]
pNL2.3[secNluc Hygro]
pTK-Gaussia-Dura Luc
pGL4.17[luc2 Neo]
pGL4.76[hRluc Hygro]
pNL3.1[Nluc minP]
pTK-GLuc
pGL4.18[luc2P Neo]
pGL4.77[hRlucP Hygro]
pNL3.2.NF-kB-RE[NlucP NF-kB-RE Hygro]
pTK-Green Renilla Luc
pGL4.19[luc2CP Neo]
pGL4.78[hRlucCP Hygro]
pNL3.2[NlucP minP]
pTK-Red Firefly Luc
pGL4.20[luc2 Puro]
pGL4.79[hRluc Neo]
pNL3.3[secNluc minP]
pXPG
pGL4.21[luc2P Puro]
pGL4.80[hRlucP Neo]
pRL-CMV

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